Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885308.1_cds_XP_016439282.1_34852
CDS Infomation

[gene=LOC107765179] [db_xref=GeneID:107765179] [protein=endochitinase A-like] [protein_id=XP_016439282.1] [location=join(26051..26056,26725..26881,27134..27236,28413..28590,29106..30047,30205..30477)] [gbkey=CDS]
Sequence

ATGGCAACGTCAGTGCAATGTAGGCTACAAGAAAGGACTCTAGGAATGGTGATGAGGGAA
GTAGATGAAGACCTTGCAATGTTTCTTGAGATGCGTCGTAGCGAAAAGGAGATGAATGAT
CAAATTCCTAAACATAACTGTGAGGAATCGGATCCGCAATTAGGCTCAGAGGTTGACTTC
TCTTTGTTATCAAATGGGACATCAACAGAGCCTGCTAATCAAGATTATCTTCTAAACTCT
GAGAATGACAAGAATGACTATGACTGGCTCCTTTCACTGCCTCATACCCCTTCAAATCCA
TCACTAGAGTTGGAAGAACAGAATATTGCTCCACACCAGAATGCGACAGATTCTAGTTCA
ACTGCTCAAGACTGTAAAATTGAGACAAATTCAAGTACAACTGCTCCAGAATCTAAAATA
AGCATCGAGCAGGATTTAGCTCAGCCTGAGAATTCCCTTGAAGGACCATCTTCGCGGAGC
AATTCAACTGGACTGCTGGCCGTGTCCAGAAGAAAAAACTCTTGTGCTGGAAATGGAAGG
CCTTTATCATCAGGGGGAAAAATGGCAACTTCCACAAGGTCAGCAACGCCTACTGGACGT
CCTCGTATTTCTGCATCCAAGCCCTCAAGAGCTTCCACTCCTACTTCAAGAGCAACATTG
CCTTCTGTTAAGCCTGTTGCTTCCACAGCAAGATCCTCAACTCCAACAAGAGCTGCTCCA
CGCTCTTCTACCCCAACCAGTAGACCCTCCAAACCAGCTGCCTCCAAGTCAGCATCAAGG
TCAGCAACACCAACTCGTCGACCATCAACTCCATCGTCCATTCCTATTGTATCGATTTCT
GGGGCTCGATCTTCTTCTTTGACAAAAATGGGAACCACAACCTCAAGAAAAACTGCAGCA
TCACGAGGTACCTCTCCAACTATGAAGTCTAGGCCATTGAAACCCTTGGAGACACCAAGT
CTTTCGCGTGATTCTTCTATTAATTCTAAGACATTGGTGCCTAAAAGGCCTGCATCTGCA
TCTAGGGGAAGACCGAGTGCACCTGGTGCTCGACCCTCTACCACTAATTCAAGTTCTGAT
GGAAAACCCAGACGGAAGTCGTGTTCTCCTTCTAGAGGACGAGCAACAAATGCTACTATT
TTGAGCAATGCAATCACTCTACTGTCCAAAAGTAGGGGGCACGGTTATGAGAAAGATGAT
GTGAACCCTGTGTTGATCGGCACACAGATGGTTGAAAGGGTAGTAAACATGAGGAAGTTA
GCTCCCCCGAAGCAAGATGATAATCCATATCACGAGAACCCCTCCAAGAAATCTTTGTCC
CGGGAAAATTCAGGCTTCGGAAGATCATTTTCCAAAAAATCTTTGGATATGGCTCTACGG
CACATGGATATAAGACGAAGTGTTAATGGAACCTTACGCCCAGTTCTGACAAGGGTCTCA
TCTTCTTCAGCAAACAGTATCCGGTCTAGCTCCACAAAGAACAAGACAGGTAGCGTTTCT
GATTCGCCACTTGCCACGAGCAGCACTGCTAGTTCCGAACCTTGTATCAACAATAGCTCT
AATAATGTAAATTGGAGTGAACCGGAGGATGATAACTTTGGTTGTGAGAGGGAACTATTG
TCCCCTACTAGCCAGCAACATCTGGAGCAGTACGTGTAG

Peptide Sequence

PEP ID

XP_016439282.1
PEP Infomation

PREDICTED: endochitinase A-like [Nicotiana tabacum]
Sequence

MATSVQCRLQERTLGMVMREVDEDLAMFLEMRRSEKEMNDQIPKHNCEESDPQLGSEVDF
SLLSNGTSTEPANQDYLLNSENDKNDYDWLLSLPHTPSNPSLELEEQNIAPHQNATDSSS
TAQDCKIETNSSTTAPESKISIEQDLAQPENSLEGPSSRSNSTGLLAVSRRKNSCAGNGR
PLSSGGKMATSTRSATPTGRPRISASKPSRASTPTSRATLPSVKPVASTARSSTPTRAAP
RSSTPTSRPSKPAASKSASRSATPTRRPSTPSSIPIVSISGARSSSLTKMGTTTSRKTAA
SRGTSPTMKSRPLKPLETPSLSRDSSINSKTLVPKRPASASRGRPSAPGARPSTTNSSSD
GKPRRKSCSPSRGRATNATILSNAITLLSKSRGHGYEKDDVNPVLIGTQMVERVVNMRKL
APPKQDDNPYHENPSKKSLSRENSGFGRSFSKKSLDMALRHMDIRRSVNGTLRPVLTRVS
SSSANSIRSSSTKNKTGSVSDSPLATSSTASSEPCINNSSNNVNWSEPEDDNFGCERELL
SPTSQQHLEQYV

Transcript Sequence

Gene sequence data has not been registered.